BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034A11SP1|AL429846
(834 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1271 1534 0.0
>3x_Contig1271
Length = 7459
Score = 1534 bits (766), Expect = 0.0
Identities = 814/836 (97%), Gaps = 2/836 (0%)
Strand = Plus / Minus
Query: 1 gtcttggtgctctcttgatttgatagctatcactcagaaactacagtgagttttaaaaag 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2028 gtcttggtgctctcttgatttgataactatcactcagaaactacagtgagttttaaaaag 1969
Query: 61 taaaccagaagtcaaaatatgtagcttccttttattactatgaatcattcaaacagcata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1968 taaaccagaagtcaaaatatgtagcttccttttattactatgaatcattcaaacagcata 1909
Query: 121 aattttttttttcttttaaaa-ccgatcccaatttctacagtgaacatgcagtagaaaca 179
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1908 aattttttttttctttgaaaaaccgatcccaatttctacagtgaacatgcagtagaaaca 1849
Query: 180 acagaaatcagtgaggragaaaaaaaaaccaaataggaaaammagcgcctgcccctcagt 239
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1848 acagaaatcagtgaggaagaaaaaaaaaccaaataggaaaaaaagcgcctgcccctcagt 1789
Query: 240 ggggcctcgcagattgaggtctcgaatacgcgctagagagaagtctaaatttccggcggc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1788 ggggcctcgcagattgaggtctcgaatacgcgctagagagaagtctaaatttccggcggc 1729
Query: 300 gtacattagtacaatagagacaccagttcctcatattttcmtttcttttctgtttctttc 359
||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 1728 gtacattagtacaatagagacaccagtacctcatattttcatttcttttctgtttctttc 1669
Query: 360 ttttcgtattcattttcatgtcaaaatagctgcttccagtatatctctcgaag-gcgcca 418
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 1668 ttttcgtattcattttcatgtcaaaatagctgcttccagtatatctctcgaagagcgcaa 1609
Query: 419 gtctgagtcatatggrttatmggtgaataaacagaaaaaagagaaaagaaaaatgcmtat 478
|| ||||| |||||| |||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 1608 gtatgagtaatatggattataggtgaataaacagaaaaaagagaaaagaaaaatgcatat 1549
Query: 479 acacacmaacacggagggccagggaaammatatgcgatgtgaaattttcgttgttgttga 538
|||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 1548 acacacaaacacggagggccaggaaaaaaatatgcgatgtgaaattttcgttgttgttga 1489
Query: 539 ttgtgggaaccataaatacgactggccctgggccttcatgaaacggacgtgaaggacatg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1488 ttgtgggaaccataaatacgactggccctgggccttcatgaaacggacgtgaaggacatg 1429
Query: 599 ctattgtcttatcatctttcttattgaattttgtcttgaaattttttttacaattgcaag 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1428 ctattgtcttatcatctttcttattgaattttgtcttgaaattttttttacaattgcaag 1369
Query: 659 graccacacagaccttcggkaatacctttttcactttcttttctttcaaattagtcgcac 718
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1368 gaaccacacagaccttcggtaatacctttttcactttcttttctttcaaattagtcgcac 1309
Query: 719 gtgacctagaactgattttcaatcgaaaaacagaaaaagagaaaacaccgaaaccaaaag 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1308 gtgacctagaactgattttcaatcgaaaaacagaaaaagagaaaacaccgaaaccaaaag 1249
Query: 779 aaaccacacatatcacgtgaacatcaaactagtatgtwttaatttttttgcaaggg 834
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1248 aaaccacacatatcacgtgaacatcaaactagtatgtattaatttttttgcaaggg 1193
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,883
Number of Sequences: 1807
Number of extensions: 10883
Number of successful extensions: 425
Number of sequences better than 1.0e-20: 1
length of query: 834
length of database: 10,358,551
effective HSP length: 16
effective length of query: 818
effective length of database: 10,329,639
effective search space: 8449644702
effective search space used: 8449644702
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)